PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR05G17110.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 406aa    MW: 45123.9 Da    PI: 9.1312
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR05G17110.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.71.4e-094787545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                     k  rr+++NReAA++sR+RKka++++Le+   +L++  ++L
  LPERR05G17110.2 47 KTLRRLAQNREAAKKSRLRKKAYVQQLENSRLKLTQLEQEL 87
                     6789************************9877777766555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-543112IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.9444589IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.85E-64790No hitNo description
PfamPF001706.6E-74787IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-74892No hitNo description
PROSITE patternPS0003605065IPR004827Basic-leucine zipper domain
PfamPF141442.5E-31129204IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MVYASPGTDA STDPDIDKNI RMFEQGHLPT PITSDSSDKS KGKLGQKTLR RLAQNREAAK  60
KSRLRKKAYV QQLENSRLKL TQLEQELQRA RQQGIIISTS GEQHLSTSGN EALNFNMEYV  120
RWLEEHNKQI NELRTAVHTH AGDDDLQNIV STIMTHHEEI FRLKSLAAKS DAVHVLSGTW  180
RTPLERCFLW LGGFRPSELL KLLVDQLEPL TEQQLANICN QQQTSQKSEE TLSQGMEAIQ  240
RSLADTVASQ LGRAGSSSSS GNTADHTAEA LEKIGAMESF LRQADDLRMQ SLQKMQRVLT  300
TRQSARALLL ASDYFSRIRA LSSLWIAREV RALLSLDWDR PLRATTASKQ IRDHAVAGAA  360
SRPRSVLFNG NCFSFPATDG ELGLVAVEAA AAAATEEKHK TNRPVG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015639148.10.0PREDICTED: transcription factor HBP-1b(c1)-like isoform X1
SwissprotQ415581e-161HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0D9WI320.0A0A0D9WI32_9ORYZ; Uncharacterized protein
STRINGOB05G28710.10.0(Oryza brachyantha)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-123bZIP family protein